STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85840.1KEGG: dps:DP1837 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (264 aa)    
Predicted Functional Partners:
ADH85839.1
PFAM: ABC-2 type transporter; KEGG: dps:DP1836 ABC transporter permease.
 
  
 0.978
ADH85841.1
KEGG: dps:DP1838 hypothetical protein.
 
     0.944
ADH84814.1
ABC transporter related protein; KEGG: dps:DP1271 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.895
ADH85842.1
KEGG: dps:DP1839 hypothetical protein.
 
     0.863
ADH86346.1
KEGG: hha:Hhal_1918 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
0.812
ADH85838.1
KEGG: azo:azo0285 acyl carrier protein.
 
   
 0.671
ADH85233.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: aeh:Mlg_2177 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    
0.623
ADH85837.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: dps:DP1817 3-oxoacyl-(acyl carrier protein) synthase III.
 
     0.616
ADH87298.1
KEGG: hha:Hhal_0491 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 
 0.583
ADH86810.1
KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
  
 
 0.507
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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