Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADH86245.1 | ADH86247.1 | DaAHT2_1550 | DaAHT2_1552 | KEGG: sfu:Sfum_3445 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp. | KEGG: gme:Gmet_0546 hypothetical protein. | 0.416 |
ADH86245.1 | thiC | DaAHT2_1550 | DaAHT2_1551 | KEGG: sfu:Sfum_3445 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.440 |
ADH86247.1 | ADH86245.1 | DaAHT2_1552 | DaAHT2_1550 | KEGG: gme:Gmet_0546 hypothetical protein. | KEGG: sfu:Sfum_3445 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp. | 0.416 |
ADH86247.1 | ADH86248.1 | DaAHT2_1552 | DaAHT2_1553 | KEGG: gme:Gmet_0546 hypothetical protein. | HhH-GPD family protein; KEGG: dps:DP1908 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. | 0.553 |
ADH86247.1 | thiC | DaAHT2_1552 | DaAHT2_1551 | KEGG: gme:Gmet_0546 hypothetical protein. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.723 |
ADH86248.1 | ADH86247.1 | DaAHT2_1553 | DaAHT2_1552 | HhH-GPD family protein; KEGG: dps:DP1908 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. | KEGG: gme:Gmet_0546 hypothetical protein. | 0.553 |
ADH86248.1 | thiC | DaAHT2_1553 | DaAHT2_1551 | HhH-GPD family protein; KEGG: dps:DP1908 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.520 |
thiC | ADH86245.1 | DaAHT2_1551 | DaAHT2_1550 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | KEGG: sfu:Sfum_3445 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp. | 0.440 |
thiC | ADH86247.1 | DaAHT2_1551 | DaAHT2_1552 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | KEGG: gme:Gmet_0546 hypothetical protein. | 0.723 |
thiC | ADH86248.1 | DaAHT2_1551 | DaAHT2_1553 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | HhH-GPD family protein; KEGG: dps:DP1908 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. | 0.520 |