STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86385.1PFAM: Radical SAM domain protein; KEGG: dps:DP1477 heme biosynthesis protein. (346 aa)    
Predicted Functional Partners:
ADH86621.1
Radical SAM domain protein; KEGG: dps:DP1281 coenzyme PQQ synthesis protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
  
  0.964
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.903
ADH86670.1
KEGG: dps:DP0753 hypothetical protein.
  
     0.708
ADH85828.1
PFAM: Radical SAM domain protein; KEGG: dps:DP1855 coenzyme PQQ synthesis protein.
  
     0.684
ADH86383.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dal:Dalk_1572 short-chain dehydrogenase/reductase SDR.
  
   
 0.673
ADH86188.1
KEGG: dps:DP0897 hypothetical protein.
  
     0.633
ADH86975.1
KEGG: dps:DP0111 hypothetical protein.
  
     0.622
ADH85391.1
PFAM: ketose-bisphosphate aldolase class-II; KEGG: geo:Geob_1850 ketose-bisphosphate aldolase class-II.
  
     0.615
ADH86957.1
KEGG: dps:DP0006 hypothetical protein.
  
     0.580
ADH86384.1
KEGG: dps:DP1684 hypothetical protein.
       0.534
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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