STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86391.1KEGG: dvl:Dvul_1731 hypothetical protein. (259 aa)    
Predicted Functional Partners:
ADH86390.1
KEGG: dal:Dalk_0240 hypothetical protein.
 
    
0.784
ADH86389.1
KEGG: dde:Dde_2573 putative lipoprotein.
       0.701
ADH86392.1
KEGG: pvi:Cvib_1525 hypothetical protein.
       0.682
ADH86674.1
KEGG: cts:Ctha_2615 hypothetical protein.
  
     0.541
ADH86672.1
KEGG: drt:Dret_0682 hypothetical protein.
  
     0.452
ADH85017.1
PFAM: nucleoside recognition domain protein; KEGG: dsa:Desal_0120 nucleoside recognition domain protein.
  
     0.424
ADH86393.1
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
       0.419
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.