STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86402.1PFAM: alpha/beta hydrolase fold; KEGG: tgr:Tgr7_3040 alpha/beta fold family hydrolase. (270 aa)    
Predicted Functional Partners:
ADH86403.1
KEGG: aeh:Mlg_2405 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
 
   
 0.738
ADH86810.1
KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
  
 
 0.696
ADH85298.1
PFAM: alpha/beta hydrolase fold; KEGG: swd:Swoo_3756 alpha/beta hydrolase fold.
  
     0.688
ADH86454.1
PFAM: UbiA prenyltransferase; KEGG: mxa:MXAN_6629 hypothetical protein.
 
  
 0.550
ADH85984.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1371 butyryl-CoA dehydrogenase.
  
 0.448
ADH86028.1
KEGG: dae:Dtox_3786 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; GAF domain protein; response regulator receiver.
  
 
 0.437
ADH85833.1
All-trans-retinol 13,14-reductase; KEGG: dps:DP1860 hypothetical protein; PFAM: amine oxidase.
 
  
 0.417
ADH86443.1
PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll6742 long chain acyl-CoA synthetase.
 
 
 
 0.417
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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