STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86437.1KEGG: tbd:Tbd_0290 hypothetical protein; TIGRFAM: eight transmembrane protein EpsH; EpsI family protein; PFAM: Exosortase EpsH-related. (534 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.999
ADH86431.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: dat:HRM2_19670 GumC1.
 
     0.762
ADH86432.1
SMART: AAA ATPase; KEGG: sat:SYN_00778 general secretion pathway protein A.
 
    0.747
ADH85170.1
KEGG: mca:MCA0061 general secretion pathway protein A; PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase.
 
    0.745
ADH87047.1
SMART: AAA ATPase; KEGG: dal:Dalk_4816 type II secretory pathway component ExeA (predicted ATPase)-like protein.
 
    0.718
ADH86475.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: dat:HRM2_22640 TPR domain protein.
 
     0.640
ADH86426.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mxa:MXAN_3225 polysaccharide biosynthesis/export protein.
 
     0.622
ADH86433.1
Capsular exopolysaccharide family; KEGG: dat:HRM2_19680 putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase); TIGRFAM: capsular exopolysaccharide family.
 
    0.507
ADH86810.1
KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
 
  
 0.441
ADH86438.1
PFAM: polysaccharide deacetylase; KEGG: tgr:Tgr7_2375 polysaccharide deacetylase.
 
     0.400
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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