STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86529.1PFAM: protein of unknown function DUF497; KEGG: vcm:VCM66_A0383 hypothetical protein. (86 aa)    
Predicted Functional Partners:
ADH86527.1
KEGG: hypothetical protein LOC100246913; K11855 ubiquitin carboxyl-terminal hydrolase 36/42.
       0.773
ADH86528.1
KEGG: pph:Ppha_1716 helix-turn-helix protein, CopG family.
       0.773
ADH86530.1
Hypothetical protein; KEGG: lhk:LHK_00370 AceK.
       0.773
ADH86531.1
KEGG: cti:pRALTA_0111 hypothetical protein.
       0.668
ADH85716.1
KEGG: hna:Hneap_0688 hypothetical protein.
 
     0.645
ADH85714.1
Transcriptional regulator, XRE family; KEGG: maq:Maqu_3850 virulence gene repressor RsaL; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
     0.503
ADH87288.1
PFAM: PilT protein domain protein; KEGG: bmj:BMULJ_04727 PilT protein domain protein.
  
     0.490
ADH87304.1
PFAM: PilT protein domain protein; KEGG: bmj:BMULJ_04727 PilT protein domain protein.
  
     0.476
ADH86533.1
PFAM: plasmid stabilization system; KEGG: tte:TTE2029 hypothetical protein.
 
   
 0.470
ADH86532.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: eba:ebA65 hypothetical protein.
 
     0.457
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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