Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH86642.1KEGG: dps:DP0127 hypothetical protein. (110 aa)    
Predicted Functional Partners:
ADH85295.1
PFAM: protein of unknown function DUF181; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: dps:DP1955 hypothetical protein.
  
     0.773
ADH86670.1
KEGG: dps:DP0753 hypothetical protein.
  
     0.769
ADH86612.1
KEGG: dps:DP2929 hypothetical protein.
  
     0.767
ADH85262.1
KEGG: dps:DP2176 hypothetical protein.
  
     0.760
ADH85017.1
PFAM: nucleoside recognition domain protein; KEGG: dsa:Desal_0120 nucleoside recognition domain protein.
  
     0.751
ADH86885.1
SMART: TRASH domain protein; KEGG: drt:Dret_1349 TRASH domain protein.
  
     0.746
ADH86638.1
KEGG: dps:DP0712 hypothetical protein.
  
     0.717
ADH86341.1
KEGG: dps:DP0068 hypothetical protein.
  
     0.716
ADH85009.1
PFAM: Dissimilatory sulfite reductase D; KEGG: dps:DP0799 DsrD protein.
  
     0.714
ADH86169.1
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: dps:DP2891 Ntr two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
     0.702
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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