STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86672.1KEGG: drt:Dret_0682 hypothetical protein. (202 aa)    
Predicted Functional Partners:
ADH85017.1
PFAM: nucleoside recognition domain protein; KEGG: dsa:Desal_0120 nucleoside recognition domain protein.
  
     0.761
ADH86163.1
KEGG: dps:DP1108 heterodisulfide reductase, subunit E (HdrE).
  
     0.758
ADH87172.1
PFAM: histidine kinase A domain protein; KEGG: dal:Dalk_2935 histidine kinase A domain-containing protein.
  
     0.752
ADH86670.1
KEGG: dps:DP0753 hypothetical protein.
 
     0.747
ADH85262.1
KEGG: dps:DP2176 hypothetical protein.
  
     0.721
ADH85243.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: dal:Dalk_2029 cupin 2 conserved barrel domain protein.
  
     0.707
ADH86638.1
KEGG: dps:DP0712 hypothetical protein.
  
     0.691
ADH86642.1
KEGG: dps:DP0127 hypothetical protein.
  
     0.669
ADH86637.1
KEGG: dps:DP0713 hypothetical protein.
  
     0.665
ADH87169.1
KEGG: dol:Dole_2335 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
     0.653
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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