Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH86678.1PFAM: phosphoribosyltransferase; KEGG: gsu:GSU0124 competence protein F, putative. (255 aa)    
Predicted Functional Partners:
ADH85765.1
KEGG: dps:DP1704 ComE operon protein 3; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.914
ADH86984.1
KEGG: gsu:GSU2550 DNA processing protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
 
 
 0.897
ADH84932.1
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: tme:Tmel_1711 putative PAS/PAC sensor protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein.
  
    0.849
ADH86089.1
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: gsu:GSU0489 Mg chelatase-related protein; SMART: AAA ATPase.
 
  
 0.806
ADH86677.1
PFAM: Protein of unknown function; KEGG: dat:HRM2_46210 hypothetical protein.
       0.762
ADH85140.1
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Prephenate dehydrogenase; KEGG: dps:DP2275 P-protein.
  
    0.714
ADH85864.1
PFAM: protein of unknown function UPF0102; KEGG: dal:Dalk_4642 protein of unknown function UPF0102; Belongs to the UPF0102 family.
 
    0.709
ADH86635.1
KEGG: dps:DP0715 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.661
ADH85344.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: hha:Hhal_2150 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; Hpt domain protein.
  
  
 0.646
mtnA
Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.626
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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