Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADH86687.1Peptidase T-like protein; KEGG: dps:DP0258 hypothetical protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase dimerisation domain protein; peptidase M20. (386 aa)    
Predicted Functional Partners:
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
      0.628
ADH86595.1
PFAM: peptidase M24; creatinase; KEGG: dps:DP0126 Xaa-Pro dipeptidase.
 
 
 0.612
ADH84732.1
PFAM: protein of unknown function DUF34; KEGG: dps:DP0634 hypothetical protein.
 
    0.589
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.449
ADH86584.1
KEGG: dps:DP2957 competence-damage inducible protein (CinA); TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; Belongs to the CinA family.
   
  
 0.426
ADH86969.1
Sun protein; KEGG: dol:Dole_2231 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
     
 0.419
ADH85668.1
PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: dps:DP1442 oligopeptidase.
  
  
 0.413
ADH86686.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sth:STH3333 ParA family ATPase.
  
    0.411
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.