Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADH86800.1KEGG: dol:Dole_1539 pyridoxamine 5'-phosphate oxidase-related FMN-binding. (133 aa)    
Predicted Functional Partners:
ADH84918.1
PFAM: Rhodanese domain protein; KEGG: gur:Gura_2538 rhodanese domain-containing protein.
  
     0.663
ADH85404.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sat:SYN_02058 4Fe-4S binding protein.
  
 
   0.545
ADH85177.1
KEGG: dps:DP2601 hypothetical protein.
  
     0.505
ADH86901.1
KEGG: gme:Gmet_1933 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
  
 
   0.474
ADH85847.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: dps:DP2597 hypothetical protein.
  
     0.448
ADH86799.1
KEGG: SORBIDRAFT_06g020190; hypothetical protein; K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
       0.443
ADH87275.1
KEGG: sfu:Sfum_0245 transcriptional regulator.
  
     0.428
ADH84921.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_0274 hypothetical protein.
  
     0.427
ADH84837.1
KEGG: tye:THEYE_A1686 hypothetical protein.
  
     0.422
ADH85949.1
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pca:Pcar_2857 hypothetical protein.
  
     0.419
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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