STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH86896.1KEGG: hch:HCH_05426 hypothetical protein. (429 aa)    
Predicted Functional Partners:
ADH86900.1
KEGG: hch:HCH_05429 RND superfamily exporter.
 
   
 0.820
ADH86899.1
KEGG: aeh:Mlg_2743 putative outer membrane protein.
 
    0.812
ADH86895.1
KEGG: rfr:Rfer_3758 hypothetical protein.
 
     0.650
ADH86220.1
KEGG: tau:Tola_1362 CRISPR-associated protein, Csy3 family; TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3.
   
   0.594
ADH86222.1
CRISPR-associated protein, Csy1 family; KEGG: pay:PAU_02721 hypothetical protein; TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1.
   
   0.401
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.