Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADH86953.1 | ADH86955.1 | DaAHT2_2288 | DaAHT2_2290 | PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_0902 SNARE associated Golgi protein. | Hypothetical protein; KEGG: rpe:RPE_3321 ABC transporter related. | 0.788 |
ADH86953.1 | pcm | DaAHT2_2288 | DaAHT2_2289 | PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_0902 SNARE associated Golgi protein. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.814 |
ADH86955.1 | ADH86953.1 | DaAHT2_2290 | DaAHT2_2288 | Hypothetical protein; KEGG: rpe:RPE_3321 ABC transporter related. | PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_0902 SNARE associated Golgi protein. | 0.788 |
ADH86955.1 | pcm | DaAHT2_2290 | DaAHT2_2289 | Hypothetical protein; KEGG: rpe:RPE_3321 ABC transporter related. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.812 |
pcm | ADH86953.1 | DaAHT2_2289 | DaAHT2_2288 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | PFAM: SNARE associated Golgi protein; KEGG: dal:Dalk_0902 SNARE associated Golgi protein. | 0.814 |
pcm | ADH86955.1 | DaAHT2_2289 | DaAHT2_2290 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Hypothetical protein; KEGG: rpe:RPE_3321 ABC transporter related. | 0.812 |