STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH87079.1Hypothetical protein; KEGG: xfn:XfasM23_1862 glycosyl transferase family protein. (579 aa)    
Predicted Functional Partners:
ADH87080.1
PFAM: amine oxidase; KEGG: gbm:Gbem_2934 hypothetical protein.
       0.686
ADH87081.1
KEGG: dau:Daud_1620 redox-active disulfide protein 2.
       0.686
ADH87082.1
PFAM: RimK domain protein ATP-grasp; KEGG: oih:OB2059 hypothetical protein.
       0.607
ADH87083.1
Hypothetical protein; KEGG: sma:SAV_5635 glycyl-tRNA synthetase.
       0.580
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.