STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH87285.1PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: gur:Gura_4319 protein of unknown function DUF395, YeeE/YedE. (370 aa)    
Predicted Functional Partners:
ADH87077.1
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mgm:Mmc1_1601 protein of unknown function DUF395, YeeE/YedE.
  
     0.567
ADH84723.1
PFAM: heat shock protein DnaJ domain protein; KEGG: gsu:GSU2756 hypothetical protein.
  
     0.488
ADH87286.1
KEGG: tgr:Tgr7_0568 hypothetical protein.
       0.461
ADH87287.1
PFAM: MscS Mechanosensitive ion channel; KEGG: tgr:Tgr7_0569 MscS mechanosensitive ion channel.
       0.461
ADH84920.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: geo:Geob_3773 peptidase M20.
  
     0.433
ADH85139.1
PFAM: protein of unknown function DUF445; KEGG: pca:Pcar_0273 hypothetical protein.
  
     0.405
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.