STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP42478.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (963 aa)    
Predicted Functional Partners:
AJP44265.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
AJP44954.1
Hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.680
AJP44194.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
AJP42374.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.591
AJP44691.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.569
AJP43342.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.521
AJP42762.1
N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
AJP42479.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.480
AJP45171.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.468
AJP45439.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.463
Your Current Organism:
Alteromonas australica
NCBI taxonomy Id: 589873
Other names: A. australica, Alteromonas australica Ivanova et al. 2013, Alteromonas sp. H17, CIP 109921, KMM 6016, strain H 17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.