STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferp_0441KEGG: csc:Csac_0098 hypothetical protein. (633 aa)    
Predicted Functional Partners:
Ferp_0442
PFAM: protein of unknown function DUF87; KEGG: csc:Csac_0097 ATPase-like protein.
       0.732
Ferp_0443
PFAM: transposase IS3/IS911 family protein; KEGG: sru:SRU_2706 ISSru3, transposase InsA.
       0.693
Ferp_0444
PFAM: FeoA family protein; KEGG: tko:TK0958 iron(II) transport protein A.
       0.456
Ferp_0445
PFAM: FeoA family protein; KEGG: tle:Tlet_0887 FeoA family protein.
       0.456
Ferp_0446
TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: tko:TK0714 iron(II) transport protein B.
       0.456
Ferp_0447
KEGG: tpe:Tpen_0977 hypothetical protein.
       0.456
Ferp_0439
PFAM: DNA polymerase beta domain protein region; KEGG: drm:Dred_0524 DNA polymerase beta subunit.
       0.445
Ferp_0440
PFAM: HEPN domain protein; KEGG: tko:TK1072 hypothetical protein.
       0.445
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.