Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ferp_1237PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpe:Tpen_1462 ABC transporter related. (225 aa)    
Predicted Functional Partners:
Ferp_1778
PFAM: ABC-2 type transporter; KEGG: afu:AF1005 ABC transporter, ATP-binding protein, putative.
  
 0.965
Ferp_1235
KEGG: mja:MJ0210.1 hypothetical protein.
       0.773
Ferp_1236
Hypothetical protein; KEGG: tte:TTE2144 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
       0.773
Ferp_0133
KEGG: rmr:Rmar_2016 copper ABC transporter, permease protein.
  
 
 0.709
Ferp_0769
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: afu:AF1471 hypothetical protein.
  
  
 0.651
Ferp_1896
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pfu:PF0708 hypothetical protein.
  
  
 0.651
Ferp_1238
KEGG: afu:AF0375 hypothetical protein.
       0.584
rpl14
50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
 
  
 0.525
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
 
 
 0.521
Ferp_1239
PFAM: DNA polymerase beta domain protein region; KEGG: tpe:Tpen_1459 DNA polymerase beta subunit.
       0.507
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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