STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferp_1418PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: hut:Huta_2163 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. (370 aa)    
Predicted Functional Partners:
Ferp_1413
PFAM: MaoC domain protein dehydratase; KEGG: afu:AF1124 hypothetical protein.
 
 
 0.949
Ferp_1424
PFAM: MaoC domain protein dehydratase; KEGG: afu:AF1124 hypothetical protein.
 
 
 0.949
Ferp_1419
PFAM: alpha/beta hydrolase fold; KEGG: hwa:HQ2310A poly-beta-hydroxybutyrate polymerase polyhydroxyalkanoic acid synthase PhaC.
  
  
 
0.908
Ferp_1417
KEGG: hypothetical protein.
       0.773
Ferp_1416
PFAM: Methyltransferase type 11; KEGG: bhy:BHWA1_01138 putative methyltransferase type 11.
       0.564
Ferp_2450
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: afu:AF1197 3-ketoacyl-CoA thiolase (FadA-2).
 
  
 0.420
Ferp_1004
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cbf:CLI_3339 acetyl-CoA acetyltransferase.
 
  
 0.402
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.