STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferp_1582TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: afu:AF1289 hypothetical protein. (347 aa)    
Predicted Functional Partners:
Ferp_1580
methylmalonyl-CoA mutase, large subunit; KEGG: afu:AF1288a methylmalonyl-CoA mutase N-terminal domain-containing protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
  
 0.995
Ferp_1581
PFAM: cobalamin B12-binding domain protein; KEGG: afu:AF1288b methylmalonyl-CoA mutase C-terminal domain-containing protein.
  
 0.989
Ferp_1836
KEGG: afu:AF2215 methylmalonyl-CoA mutase, subunit alpha, N-terminus (mcmA1); TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
  
 0.983
Ferp_2331
KEGG: eba:ebA2060 methylmalonyl-CoA mutase subunit alpha; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
  
 0.982
Ferp_1831
PFAM: cobalamin B12-binding domain protein; KEGG: afu:AF2219 methylmalonyl-CoA mutase, subunit alpha, C-terminus (mcmA2).
  
 0.960
Ferp_2330
PFAM: cobalamin B12-binding domain protein; KEGG: afu:AF2219 methylmalonyl-CoA mutase, subunit alpha, C-terminus (mcmA2).
  
 0.950
Ferp_1832
TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afu:AF2218 hypothetical protein.
  
 0.863
Ferp_1584
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: afu:AF0115 hypothetical protein.
       0.792
Ferp_1583
KEGG: afu:AF0114 transcriptional regulatory protein, putative.
     
 0.777
Ferp_1579
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: afu:AF2057 acyl-CoA dehydrogenase (acd-10).
     
 0.650
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.