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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferp_1663KEGG: afu:AF0789 hypothetical protein. (104 aa)    
Predicted Functional Partners:
Ferp_1664
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: afu:AF0949 glutamine synthetase (GlnA).
       0.726
Ferp_1662
PFAM: protein of unknown function DUF362; KEGG: afu:AF1306 hypothetical protein.
       0.651
Ferp_1665
PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mth:MTH194 glutamate synthase (NADPH), alpha subunit; Belongs to the glutamate synthase family.
       0.453
Ferp_1666
PFAM: glutamate synthase alpha subunit domain protein; KEGG: mth:MTH192 tungsten formylmethanofuran dehydrogenase, subunit C-like protein.
       0.453
Ferp_1667
PFAM: glutamine amidotransferase class-II; KEGG: mth:MTH191 glutamine PRPP amidotransferase.
       0.453
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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