STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ferp_1725PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afu:AF2249 response regulator. (118 aa)    
Predicted Functional Partners:
Ferp_1079
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: afu:AF1044 purine-binding chemotaxis protein (CheW).
  
 0.979
Ferp_1075
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: afu:AF1040 chemotaxis histidine kinase (CheA).
  
 
 0.974
Ferp_1074
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: afu:AF1039 hypothetical protein.
 
 
 0.968
Ferp_1990
KEGG: afu:AF1045 methyl-accepting chemotaxis protein (TlpC-2); TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS domain containing protein.
  
 0.960
Ferp_1080
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: afu:AF1045 methyl-accepting chemotaxis protein (TlpC-2).
  
 0.958
Ferp_1077
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afu:AF1042 chemotaxis response regulator (CheY).
  
  
 
0.907
Ferp_1726
KEGG: afu:AF0770 signal-transducing histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein.
 
 
 0.905
Ferp_0251
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afu:AF0449 response regulator.
  
  
 
0.904
Ferp_1727
Putative PAS/PAC sensor protein; KEGG: afu:AF1035 chemotaxis histidine kinase, putative; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.835
Ferp_0280
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: afu:AF1721 signal-transducing histidine kinase.
 
 
 0.795
Your Current Organism:
Ferroglobus placidus
NCBI taxonomy Id: 589924
Other names: F. placidus DSM 10642, Ferroglobus placidus AEDII12DO, Ferroglobus placidus DSM 10642, Ferroglobus placidus str. DSM 10642, Ferroglobus placidus strain DSM 10642
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