STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246875_00243Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_000246875_00225
Unannotated protein.
   
   0.846
GCA_000246875_00244
Unannotated protein.
     
 0.710
GCA_000246875_03177
Unannotated protein.
 
  
 0.697
GCA_000246875_03940
Unannotated protein.
  
 0.686
GCA_000246875_02459
Unannotated protein.
    
  0.671
GCA_000246875_02785
Unannotated protein.
    
  0.671
GCA_000246875_01647
Unannotated protein.
 
  
  0.666
GCA_000246875_00948
Unannotated protein.
    
 0.566
GCA_000246875_02524
Unannotated protein.
    
 0.555
GCA_000246875_02829
Unannotated protein.
    
 0.555
Your Current Organism:
Halomonas sp. KM1
NCBI taxonomy Id: 590061
Other names: H. sp. KM-1, Halomonas sp. KM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.