STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246875_01246Unannotated protein. (908 aa)    
Predicted Functional Partners:
GCA_000246875_01245
Unannotated protein.
 
  
 0.963
GCA_000246875_01244
Unannotated protein.
 
  
 0.957
GCA_000246875_01248
Unannotated protein.
 
    0.951
GCA_000246875_01250
Unannotated protein.
 
     0.940
GCA_000246875_01251
Unannotated protein.
 
     0.940
GCA_000246875_01254
Unannotated protein.
 
  
 0.897
GCA_000246875_01249
Unannotated protein.
 
    0.879
GCA_000246875_01247
Unannotated protein.
       0.801
GCA_000246875_01252
Unannotated protein.
       0.649
GCA_000246875_01253
Unannotated protein.
       0.638
Your Current Organism:
Halomonas sp. KM1
NCBI taxonomy Id: 590061
Other names: H. sp. KM-1, Halomonas sp. KM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.