STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246875_02257Unannotated protein. (367 aa)    
Predicted Functional Partners:
GCA_000246875_02256
Unannotated protein.
 
    
0.670
GCA_000246875_02258
Unannotated protein.
       0.623
GCA_000246875_00557
Unannotated protein.
   
   0.502
GCA_000246875_02261
Unannotated protein.
  
    0.496
GCA_000246875_02259
Unannotated protein.
  
    0.482
GCA_000246875_00408
Unannotated protein.
  
   0.477
GCA_000246875_02262
Unannotated protein.
  
    0.444
GCA_000246875_02260
Unannotated protein.
       0.443
GCA_000246875_00427
Unannotated protein.
  
    0.433
GCA_000246875_00389
Unannotated protein.
  
     0.422
Your Current Organism:
Halomonas sp. KM1
NCBI taxonomy Id: 590061
Other names: H. sp. KM-1, Halomonas sp. KM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.