STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000246875_04321Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_000246875_02572
Unannotated protein.
  
     0.719
GCA_000246875_04322
Unannotated protein.
       0.692
GCA_000246875_01827
Unannotated protein.
  
     0.689
GCA_000246875_02463
Unannotated protein.
  
     0.635
GCA_000246875_04320
Unannotated protein.
       0.608
GCA_000246875_04319
Unannotated protein.
       0.604
GCA_000246875_00038
Unannotated protein.
  
     0.592
GCA_000246875_02284
Unannotated protein.
  
     0.559
GCA_000246875_02139
Unannotated protein.
  
     0.552
GCA_000246875_00008
Unannotated protein.
  
     0.545
Your Current Organism:
Halomonas sp. KM1
NCBI taxonomy Id: 590061
Other names: H. sp. KM-1, Halomonas sp. KM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.