STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ75026.1PFAM: outer membrane efflux protein; KEGG: dze:Dd1591_3981 outer membrane efflux protein. (492 aa)    
Predicted Functional Partners:
ACZ75027.1
PFAM: secretion protein HlyD family protein; KEGG: dze:Dd1591_3980 secretion protein HlyD family protein.
 
   0.947
ACZ75025.1
PFAM: protein of unknown function DUF214; KEGG: dze:Dd1591_3982 protein of unknown function DUF214.
 
 
 0.891
ACZ75024.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dze:Dd1591_3983 ABC transporter related.
   
 
 0.828
macB
ABC transporter related protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.732
ACZ76093.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dze:Dd1591_2893 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.598
ACZ76095.1
KEGG: dze:Dd1591_2891 hypothetical protein.
  
 
 0.598
aaeA
Secretion protein HlyD family protein; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.583
ACZ77308.1
PFAM: secretion protein HlyD family protein; KEGG: dze:Dd1591_2511 secretion protein HlyD family protein.
  
 
 0.574
ACZ75023.1
KEGG: dze:Dd1591_3985 hypothetical protein.
       0.541
ACZ76911.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dze:Dd1591_2108 type I secretion membrane fusion protein, HlyD family.
  
 
 0.540
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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