STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ75249.1TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein CT1976; KEGG: dda:Dd703_3587 CRISPR-associated protein Cas5 family. (245 aa)    
Predicted Functional Partners:
ACZ75248.1
TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: dda:Dd703_3588 CRISPR-associated protein, CSE4 family.
 
 
 0.998
ACZ75246.1
TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: dda:Dd703_3590 CRISPR-associated protein, CSE1 family.
 
 
 0.997
ACZ75247.1
TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: dda:Dd703_3589 CRISPR-associated protein, CSE2 family.
 
 
 0.996
ACZ75250.1
TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: dda:Dd703_3586 CRISPR-associated protein, CSE3 family.
 
  
 0.975
ACZ75252.1
TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2; KEGG: dda:Dd703_3584 CRISPR-associated protein Cas2.
 
  
 0.963
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.957
ACZ75244.1
KEGG: dda:Dd703_3591 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase.
 
 
 0.950
ACZ78276.1
TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: dze:Dd1591_0697 CRISPR-associated helicase Cas3 family.
  
 
 0.755
ACZ75245.1
Hypothetical protein.
       0.545
ACZ78071.1
KEGG: pct:PC1_3261 hypothetical protein.
  
  
 0.469
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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