STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ75412.1KEGG: dze:Dd1591_3556 putative capsular polysaccharide bisynthesis protein. (403 aa)    
Predicted Functional Partners:
ACZ75411.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: dze:Dd1591_3557 lipopolysaccharide biosynthesis protein.
       0.801
ACZ75413.1
KEGG: dze:Dd1591_3555 putative capsular polysaccharide bisynthesis protein.
       0.800
ACZ75414.1
PFAM: glycosyl transferase family 2; KEGG: dze:Dd1591_3554 glycosyl transferase family 2.
       0.800
ACZ75408.1
KEGG: dze:Dd1591_3560 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
       0.799
ACZ75409.1
KEGG: dze:Dd1591_3559 putative capsular polysaccharide biosynthesis protein.
       0.785
ACZ75410.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: dze:Dd1591_3558 polysaccharide export protein.
       0.773
ACZ75415.1
PFAM: glycosyl transferase group 1; KEGG: dze:Dd1591_3553 glycosyl transferase group 1.
       0.766
ACZ75416.1
PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: dze:Dd1591_3552 glycosyl transferase group 1.
       0.766
ACZ75417.1
KEGG: eca:ECA0508 hypothetical protein.
       0.660
ACZ75418.1
KEGG: dze:Dd1591_3550 hypothetical protein.
       0.562
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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