STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76121.1KEGG: dze:Dd1591_2865 capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (723 aa)    
Predicted Functional Partners:
ACZ76119.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: dze:Dd1591_2867 polysaccharide export protein.
 
 
 0.959
ACZ76120.1
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: dze:Dd1591_2866 protein tyrosine phosphatase.
 
 
 0.942
ACZ76126.1
KEGG: dze:Dd1591_2860 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.847
ACZ75408.1
KEGG: dze:Dd1591_3560 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.817
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
     
 0.768
ACZ75410.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: dze:Dd1591_3558 polysaccharide export protein.
 
 
 0.703
ACZ75565.1
PFAM: sugar transferase; KEGG: dze:Dd1591_3387 sugar transferase.
 
  
 0.661
ACZ75589.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dze:Dd1591_3355 pyruvate ferredoxin/flavodoxin oxidoreductase.
    
 0.562
ACZ76122.1
PFAM: glycosyl transferase group 1; KEGG: dze:Dd1591_2864 glycosyl transferase group 1.
  
  
 0.458
ACZ76134.1
KEGG: dze:Dd1591_2852 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II.
 
  
 0.428
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.