close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76767.1KEGG: dze:Dd1591_1909 hypothetical protein. (133 aa)    
Predicted Functional Partners:
ACZ76766.1
KEGG: dze:Dd1591_1908 type III secretion lipoprotein.
     
 0.796
ACZ76764.1
KEGG: dze:Dd1591_1906 type III secretion protein.
     
 0.710
ACZ76763.1
PFAM: HrpF family protein; KEGG: dze:Dd1591_1905 HrpF family protein.
       0.685
ACZ76765.1
TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: dze:Dd1591_1907 type III secretion outer membrane pore, YscC/HrcC family.
       0.685
ACZ76768.1
PFAM: Harpin family protein; KEGG: dze:Dd1591_1910 harpin family protein.
       0.484
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.