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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76856.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dze:Dd1591_2018 short-chain dehydrogenase/reductase SDR. (224 aa)    
Predicted Functional Partners:
ACZ77879.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; KEGG: plu:plu2670 hypothetical protein.
  
  
 0.510
ACZ76855.1
KEGG: dze:Dd1591_2016 hypothetical protein.
       0.507
ACZ76857.1
KEGG: dze:Dd1591_2019 potential HrpW-specific chaperone.
       0.470
ACZ76858.1
PFAM: Pectate lyase; KEGG: dze:Dd1591_2020 pectate lyase.
       0.458
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.