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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ76867.1PFAM: glycoside hydrolase family 30; KEGG: dda:Dd703_2134 Glucuronoarabinoxylan endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 30 family. (413 aa)    
Predicted Functional Partners:
ACZ76357.1
Cellulase; KEGG: dze:Dd1591_1529 cellulase; PFAM: glycoside hydrolase family 5; Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.765
ACZ77096.1
Pectate lyase; KEGG: dze:Dd1591_2305 pectate lyase.
  
     0.728
ACZ78619.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: dze:Dd1591_0270 pectate lyase/Amb allergen.
  
     0.707
ACZ78618.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: dze:Dd1591_0271 pectate lyase/Amb allergen.
  
     0.698
ACZ77766.1
PFAM: glycosyl hydrolase 53 domain protein; KEGG: dze:Dd1591_1279 arabinogalactan endo-1,4-beta-galactosidase.
  
   
 0.693
ACZ76356.1
KEGG: dze:Dd1591_1528 parallel beta-helix repeat protein.
  
     0.687
ACZ77920.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: dze:Dd1591_1089 pectate lyase/Amb allergen.
  
     0.660
ACZ76858.1
PFAM: Pectate lyase; KEGG: dze:Dd1591_2020 pectate lyase.
 
     0.656
ACZ77919.1
PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; KEGG: dze:Dd1591_1090 pectate lyase/Amb allergen.
  
     0.647
ACZ75608.1
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dze:Dd1591_3332 myo-inositol catabolism IolB domain protein.
   
    0.640
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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