STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ77324.1PFAM: Protein of unknown function DUF2474; KEGG: dze:Dd1591_2527 hypothetical protein. (46 aa)    
Predicted Functional Partners:
ACZ77325.1
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dze:Dd1591_2528 cytochrome d ubiquinol oxidase, subunit II.
  
    0.912
ACZ77326.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dze:Dd1591_2529 cytochrome bd ubiquinol oxidase subunit I.
  
  
 0.910
ACZ76077.1
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dze:Dd1591_2909 cytochrome d ubiquinol oxidase, subunit II.
  
    0.627
ACZ76076.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dze:Dd1591_2910 cytochrome bd ubiquinol oxidase subunit I.
  
  
 0.621
ACZ77323.1
Hypothetical protein.
       0.503
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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