STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78040.1PFAM: protein of unknown function DUF466; KEGG: dze:Dd1591_0961 protein of unknown function DUF466. (67 aa)    
Predicted Functional Partners:
ACZ78041.1
PFAM: carbon starvation protein CstA; KEGG: dda:Dd703_0958 carbon starvation protein CstA.
 
  
 0.957
ACZ78039.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dze:Dd1591_0962 cobalamin synthesis protein P47K.
  
  
 0.955
ACZ76558.1
PFAM: carbon starvation protein CstA; KEGG: dze:Dd1591_1741 carbon starvation protein CstA.
 
  
 0.891
ACZ76574.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dda:Dd703_1720 cobalamin synthesis protein P47K.
  
  
 0.833
ACZ77221.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dze:Dd1591_2430 cobalamin synthesis protein P47K.
  
  
 0.532
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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