STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78042.1Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: dze:Dd1591_0959 two component transcriptional regulator, LytTR family. (241 aa)    
Predicted Functional Partners:
ACZ78043.1
KEGG: dze:Dd1591_0958 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein.
 
 
 0.972
ACZ78672.1
KEGG: dze:Dd1591_0222 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein.
 
 
 0.882
ACZ77236.1
KEGG: dze:Dd1591_2444 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.878
ACZ78041.1
PFAM: carbon starvation protein CstA; KEGG: dda:Dd703_0958 carbon starvation protein CstA.
     
 0.468
ACZ75208.1
KEGG: dze:Dd1591_3789 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein.
     
 0.443
ACZ75272.1
PFAM: conserved hypothetical protein; KEGG: dze:Dd1591_3734 hypothetical protein.
  
     0.441
ACZ78044.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dda:Dd703_0955 transcriptional regulator, GntR family.
       0.440
ACZ78163.1
PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; KEGG: dze:Dd1591_0813 Hpt sensor hybrid histidine kinase.
     
0.432
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.