STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78044.1Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dda:Dd703_0955 transcriptional regulator, GntR family. (257 aa)    
Predicted Functional Partners:
ACZ77442.1
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.748
ACZ77445.1
TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: dze:Dd1591_2694 phosphonate C-P lyase system protein PhnG.
  
  
 0.714
ACZ77435.1
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dze:Dd1591_2682 phosphonate ABC transporter, periplasmic phosphonate binding protein.
  
  
 0.698
ACZ75380.1
KEGG: dze:Dd1591_3590 transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
   
  
 0.694
ACZ77443.1
PFAM: phosphonate metabolism; KEGG: dze:Dd1591_2692 phosphonate metabolism.
 
  
 0.669
ACZ77444.1
TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: dze:Dd1591_2693 phosphonate C-P lyase system protein PhnH.
 
  
 0.648
ACZ78045.1
PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: dda:Dd703_0954 peptidase dimerisation domain protein.
 
     0.624
ACZ77439.1
TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; KEGG: dze:Dd1591_2688 phosphonate metabolism protein PhnM.
 
  
 0.610
ACZ77440.1
KEGG: dze:Dd1591_2689 phosphonate C-P lyase system protein PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.577
ACZ77441.1
KEGG: dze:Dd1591_2690 phosphonate C-P lyase system protein PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
  
  
 0.561
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.