STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78867.1Protein insertion ABC transporter, inner membrane subunit FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (325 aa)    
Predicted Functional Partners:
ftsE
Type II (General) Secretory Pathway (IISP) Family protein; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.996
ACZ75066.1
PFAM: Peptidase M23; KEGG: dze:Dd1591_3942 peptidase M23.
 
 
 
 0.932
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
     
 0.864
ACZ78476.1
PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; KEGG: dze:Dd1591_0489 cell wall hydrolase/autolysin.
 
   
 0.630
ACZ78505.1
PFAM: MscS Mechanosensitive ion channel; KEGG: dze:Dd1591_0384 MscS mechanosensitive ion channel.
   
 
 0.564
ACZ77730.1
KEGG: plu:plu4326 hypothetical protein.
   
 
 0.547
ACZ78709.1
HemY protein; KEGG: dze:Dd1591_0176 HemY protein; TIGRFAM: HemY protein; PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat.
 
     0.538
ACZ78871.1
PFAM: protein of unknown function DUF1145; KEGG: dze:Dd1591_4067 protein of unknown function DUF1145.
 
     0.536
lolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
   
 0.533
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
 
 
 0.519
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
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