STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ78871.1PFAM: protein of unknown function DUF1145; KEGG: dze:Dd1591_4067 protein of unknown function DUF1145. (95 aa)    
Predicted Functional Partners:
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.
  
    0.809
ACZ78870.1
Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.
  
    0.804
ACZ75776.1
KEGG: dze:Dd1591_3203 hypothetical protein.
  
     0.774
ACZ76823.1
KEGG: dze:Dd1591_1974 hypothetical protein.
  
     0.773
matP
Protein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.772
ACZ77073.1
PFAM: cytoplasmic chaperone TorD family protein; KEGG: dze:Dd1591_2279 cytoplasmic chaperone TorD family protein.
  
     0.772
ACZ76836.1
PFAM: protein of unknown function UPF0181; KEGG: dze:Dd1591_1988 protein of unknown function UPF0181; Belongs to the UPF0181 family.
  
     0.771
ACZ78903.1
PFAM: protein of unknown function DUF1375; KEGG: dze:Dd1591_4106 protein of unknown function DUF1375.
  
     0.768
ACZ75675.1
PFAM: protein of unknown function DUF1131; KEGG: dze:Dd1591_3284 protein of unknown function DUF1131.
  
     0.765
ACZ77072.1
PFAM: protein of unknown function DUF1439; KEGG: dze:Dd1591_2278 protein of unknown function DUF1439.
  
     0.765
Your Current Organism:
Dickeya zeae
NCBI taxonomy Id: 590409
Other names: D. zeae Ech586, Dickeya dadantii Ech586, Dickeya zeae Ech586
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.