Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G3AYS1_CANTC | G3B2M9_CANTC | G3AYS1 | G3B2M9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix-domain-containing protein. | 0.996 |
G3AYS1_CANTC | G3B4H1_CANTC | G3AYS1 | G3B4H1 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RNA helicase. | 0.995 |
G3AYS1_CANTC | G3B4S2_CANTC | G3AYS1 | G3B4S2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Nucleolar protein. | 0.984 |
G3AYS1_CANTC | G3B8K4_CANTC | G3AYS1 | G3B8K4 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Noc2-domain-containing protein. | 0.995 |
G3AYS1_CANTC | G3B956_CANTC | G3AYS1 | G3B956 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RNA-binding domain-containing protein. | 0.997 |
G3AYS1_CANTC | G3B9N6_CANTC | G3AYS1 | G3B9N6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.990 |
G3AYS1_CANTC | G3BAF2_CANTC | G3AYS1 | G3BAF2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.985 |
G3AYS1_CANTC | G3BB02_CANTC | G3AYS1 | G3BB02 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix-domain-containing protein. | 0.974 |
G3AYS1_CANTC | G3BBW1_CANTC | G3AYS1 | G3BBW1 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosomal protein L1. | 0.987 |
G3AYS1_CANTC | YTM1 | G3AYS1 | G3BEL0 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
G3B2M9_CANTC | G3AYS1_CANTC | G3B2M9 | G3AYS1 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
G3B2M9_CANTC | G3B4H1_CANTC | G3B2M9 | G3B4H1 | Brix-domain-containing protein. | RNA helicase. | 0.990 |
G3B2M9_CANTC | G3B4S2_CANTC | G3B2M9 | G3B4S2 | Brix-domain-containing protein. | Nucleolar protein. | 0.997 |
G3B2M9_CANTC | G3B8K4_CANTC | G3B2M9 | G3B8K4 | Brix-domain-containing protein. | Noc2-domain-containing protein. | 0.994 |
G3B2M9_CANTC | G3B956_CANTC | G3B2M9 | G3B956 | Brix-domain-containing protein. | RNA-binding domain-containing protein. | 0.998 |
G3B2M9_CANTC | G3B9N6_CANTC | G3B2M9 | G3B9N6 | Brix-domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.989 |
G3B2M9_CANTC | G3BAF2_CANTC | G3B2M9 | G3BAF2 | Brix-domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.996 |
G3B2M9_CANTC | G3BB02_CANTC | G3B2M9 | G3BB02 | Brix-domain-containing protein. | Brix-domain-containing protein. | 0.994 |
G3B2M9_CANTC | G3BBW1_CANTC | G3B2M9 | G3BBW1 | Brix-domain-containing protein. | Ribosomal protein L1. | 0.989 |
G3B2M9_CANTC | YTM1 | G3B2M9 | G3BEL0 | Brix-domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.991 |
page 1 of 6