Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G3AWU1_CANTC | G3AX77_CANTC | G3AWU1 | G3AX77 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like domain-containing protein. | 0.874 |
G3AWU1_CANTC | G3B0Y9_CANTC | G3AWU1 | G3B0Y9 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin. | 0.924 |
G3AWU1_CANTC | G3B3S9_CANTC | G3AWU1 | G3B3S9 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.480 |
G3AX77_CANTC | G3AWU1_CANTC | G3AX77 | G3AWU1 | Ubiquitin-like domain-containing protein. | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | 0.874 |
G3AX77_CANTC | G3AXR4_CANTC | G3AX77 | G3AXR4 | Ubiquitin-like domain-containing protein. | Phosphatases II. | 0.626 |
G3AX77_CANTC | G3B0Y9_CANTC | G3AX77 | G3B0Y9 | Ubiquitin-like domain-containing protein. | Ubiquitin. | 0.996 |
G3AX77_CANTC | G3B3N8_CANTC | G3AX77 | G3B3N8 | Ubiquitin-like domain-containing protein. | Histone-fold-containing protein. | 0.741 |
G3AX77_CANTC | G3B3S9_CANTC | G3AX77 | G3B3S9 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.667 |
G3AX77_CANTC | G3B4D2_CANTC | G3AX77 | G3B4D2 | Ubiquitin-like domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.926 |
G3AX77_CANTC | G3B4Y7_CANTC | G3AX77 | G3B4Y7 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.874 |
G3AXR4_CANTC | G3AX77_CANTC | G3AXR4 | G3AX77 | Phosphatases II. | Ubiquitin-like domain-containing protein. | 0.626 |
G3AXR4_CANTC | G3B0Y9_CANTC | G3AXR4 | G3B0Y9 | Phosphatases II. | Ubiquitin. | 0.637 |
G3AXR4_CANTC | G3B3S9_CANTC | G3AXR4 | G3B3S9 | Phosphatases II. | Uncharacterized protein. | 0.473 |
G3B0U1_CANTC | G3B3S9_CANTC | G3B0U1 | G3B3S9 | HSM3_C domain-containing protein. | Uncharacterized protein. | 0.461 |
G3B0Y9_CANTC | G3AWU1_CANTC | G3B0Y9 | G3AWU1 | Ubiquitin. | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | 0.924 |
G3B0Y9_CANTC | G3AX77_CANTC | G3B0Y9 | G3AX77 | Ubiquitin. | Ubiquitin-like domain-containing protein. | 0.996 |
G3B0Y9_CANTC | G3AXR4_CANTC | G3B0Y9 | G3AXR4 | Ubiquitin. | Phosphatases II. | 0.637 |
G3B0Y9_CANTC | G3B3N8_CANTC | G3B0Y9 | G3B3N8 | Ubiquitin. | Histone-fold-containing protein. | 0.781 |
G3B0Y9_CANTC | G3B3S9_CANTC | G3B0Y9 | G3B3S9 | Ubiquitin. | Uncharacterized protein. | 0.736 |
G3B0Y9_CANTC | G3B4D2_CANTC | G3B0Y9 | G3B4D2 | Ubiquitin. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.945 |
page 1 of 2