STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3B5U3_CANTCMatrin-type domain-containing protein. (509 aa)    
Predicted Functional Partners:
G3B904_CANTC
Uncharacterized protein.
   
 0.999
G3B985_CANTC
U1-type domain-containing protein.
    
 0.999
G3B323_CANTC
Uncharacterized protein.
   
 0.998
G3AWV3_CANTC
PSP domain-containing protein.
   
 0.997
G3B149_CANTC
Uncharacterized protein.
    
 0.997
G3B4R8_CANTC
DEAD-domain-containing protein.
   
 0.997
G3B572_CANTC
CPSF_A domain-containing protein.
   
 0.997
G3B9C3_CANTC
Sm domain-containing protein.
   
 0.996
G3B0F6_CANTC
Sm-like ribonucleo protein.
   
 0.994
G3B0X5_CANTC
U-box domain-containing protein.
   
 
 0.994
Your Current Organism:
Yamadazyma tenuis
NCBI taxonomy Id: 590646
Other names: Candida tenuis ATCC 10573, Y. tenuis ATCC 10573, Yamadazyma tenuis ATCC 10573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.