STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3B684_CANTCTryptophan synthase beta subunit-like PLP-dependent enzyme. (500 aa)    
Predicted Functional Partners:
G3B5R7_CANTC
Homoserine kinase.
 
 
 0.999
G3B2F4_CANTC
Homoserine dehydrogenase.
  
 0.995
G3BEZ8_CANTC
Threonine dehydratase.
  
 
 0.982
G3AWE6_CANTC
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 
 0.971
G3AYI9_CANTC
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 
 0.971
G3BEZ6_CANTC
3-phosphoserine transaminase.
   
 0.964
G3B2Q9_CANTC
Aspartokinase.
  
 0.949
G3B5A7_CANTC
Threonine aldolase.
  
 0.934
G3BA03_CANTC
Beta_elim_lyase domain-containing protein.
  
 0.934
G3AVY9_CANTC
Uncharacterized protein.
   
 0.911
Your Current Organism:
Yamadazyma tenuis
NCBI taxonomy Id: 590646
Other names: Candida tenuis ATCC 10573, Y. tenuis ATCC 10573, Yamadazyma tenuis ATCC 10573
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