STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3B7L3_CANTCWD40 repeat-like protein. (424 aa)    
Predicted Functional Partners:
G3AYW6_CANTC
Uncharacterized protein.
   
   0.949
G3BBW1_CANTC
Ribosomal protein L1.
   
 
 0.949
G3B8K4_CANTC
Noc2-domain-containing protein.
   
 
 0.948
G3AZA1_CANTC
Brix domain-containing protein.
   
    0.940
G3B4H1_CANTC
RNA helicase.
   
   0.940
G3B484_CANTC
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.939
G3B7C6_CANTC
ATP-dependent RNA helicase DBP9.
   
 
 0.938
G3B956_CANTC
RNA-binding domain-containing protein.
   
  
 0.936
G3B0B6_CANTC
Brix-domain-containing protein.
   
  
 0.928
G3BFC9_CANTC
CP-type G domain-containing protein.
   
 
 0.922
Your Current Organism:
Yamadazyma tenuis
NCBI taxonomy Id: 590646
Other names: Candida tenuis ATCC 10573, Y. tenuis ATCC 10573, Yamadazyma tenuis ATCC 10573
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