Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G3AYS1_CANTC | G3B4H1_CANTC | G3AYS1 | G3B4H1 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RNA helicase. | 0.995 |
G3AYS1_CANTC | G3B4S2_CANTC | G3AYS1 | G3B4S2 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Nucleolar protein. | 0.984 |
G3AYS1_CANTC | G3B8K4_CANTC | G3AYS1 | G3B8K4 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Noc2-domain-containing protein. | 0.995 |
G3AYS1_CANTC | G3B8L8_CANTC | G3AYS1 | G3B8L8 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | WD40 repeat-like protein. | 0.991 |
G3AYS1_CANTC | G3B956_CANTC | G3AYS1 | G3B956 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RNA-binding domain-containing protein. | 0.997 |
G3AYS1_CANTC | G3BB02_CANTC | G3AYS1 | G3BB02 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix-domain-containing protein. | 0.974 |
G3AYS1_CANTC | G3BC14_CANTC | G3AYS1 | G3BC14 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.999 |
G3AYS1_CANTC | SPB1 | G3AYS1 | G3B418 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.977 |
G3AYS1_CANTC | TIF6 | G3AYS1 | G3B464 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.995 |
G3AYS1_CANTC | YTM1 | G3AYS1 | G3BEL0 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
G3B4H1_CANTC | G3AYS1_CANTC | G3B4H1 | G3AYS1 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.995 |
G3B4H1_CANTC | G3B4S2_CANTC | G3B4H1 | G3B4S2 | RNA helicase. | Nucleolar protein. | 0.965 |
G3B4H1_CANTC | G3B8K4_CANTC | G3B4H1 | G3B8K4 | RNA helicase. | Noc2-domain-containing protein. | 0.993 |
G3B4H1_CANTC | G3B8L8_CANTC | G3B4H1 | G3B8L8 | RNA helicase. | WD40 repeat-like protein. | 0.992 |
G3B4H1_CANTC | G3B956_CANTC | G3B4H1 | G3B956 | RNA helicase. | RNA-binding domain-containing protein. | 0.997 |
G3B4H1_CANTC | G3BB02_CANTC | G3B4H1 | G3BB02 | RNA helicase. | Brix-domain-containing protein. | 0.985 |
G3B4H1_CANTC | G3BC14_CANTC | G3B4H1 | G3BC14 | RNA helicase. | Uncharacterized protein. | 0.997 |
G3B4H1_CANTC | SPB1 | G3B4H1 | G3B418 | RNA helicase. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.988 |
G3B4H1_CANTC | TIF6 | G3B4H1 | G3B464 | RNA helicase. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.951 |
G3B4H1_CANTC | YTM1 | G3B4H1 | G3BEL0 | RNA helicase. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.996 |
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