STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3BEC7_CANTCSAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14. (246 aa)    
Predicted Functional Partners:
G3B6C5_CANTC
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.909
G3BF18_CANTC
Transcription initiation factor IIF, beta subunit.
   
 0.895
G3BFV9_CANTC
RanBD1 domain-containing protein.
 
 
    0.888
G3B2S0_CANTC
Insert subdomain of RNA polymerase alpha subunit.
   
 0.824
G3BEA1_CANTC
Uncharacterized protein.
    
 
 0.822
G3BDJ4_CANTC
TBP-domain-containing protein.
    
 
 0.810
G3B1P1_CANTC
Uncharacterized protein.
   
 
 0.795
G3B167_CANTC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.792
G3B274_CANTC
Uncharacterized protein.
    
 
 0.787
G3BAU3_CANTC
RPOL4c domain-containing protein.
   
 0.787
Your Current Organism:
Yamadazyma tenuis
NCBI taxonomy Id: 590646
Other names: Candida tenuis ATCC 10573, Y. tenuis ATCC 10573, Yamadazyma tenuis ATCC 10573
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