Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G3B167_CANTC | G3B1P1_CANTC | G3B167 | G3B1P1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Uncharacterized protein. | 0.772 |
G3B167_CANTC | G3B2S0_CANTC | G3B167 | G3B2S0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Insert subdomain of RNA polymerase alpha subunit. | 0.999 |
G3B167_CANTC | G3B6C5_CANTC | G3B167 | G3B6C5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.998 |
G3B167_CANTC | G3BAU3_CANTC | G3B167 | G3BAU3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | RPOL4c domain-containing protein. | 0.999 |
G3B167_CANTC | G3BDJ4_CANTC | G3B167 | G3BDJ4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | TBP-domain-containing protein. | 0.944 |
G3B167_CANTC | G3BEC7_CANTC | G3B167 | G3BEC7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | SAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14. | 0.792 |
G3B167_CANTC | G3BF18_CANTC | G3B167 | G3BF18 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | Transcription initiation factor IIF, beta subunit. | 0.992 |
G3B1P1_CANTC | G3B167_CANTC | G3B1P1 | G3B167 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.772 |
G3B1P1_CANTC | G3B2S0_CANTC | G3B1P1 | G3B2S0 | Uncharacterized protein. | Insert subdomain of RNA polymerase alpha subunit. | 0.834 |
G3B1P1_CANTC | G3B6C5_CANTC | G3B1P1 | G3B6C5 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.917 |
G3B1P1_CANTC | G3BAU3_CANTC | G3B1P1 | G3BAU3 | Uncharacterized protein. | RPOL4c domain-containing protein. | 0.771 |
G3B1P1_CANTC | G3BDJ4_CANTC | G3B1P1 | G3BDJ4 | Uncharacterized protein. | TBP-domain-containing protein. | 0.999 |
G3B1P1_CANTC | G3BEC7_CANTC | G3B1P1 | G3BEC7 | Uncharacterized protein. | SAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14. | 0.795 |
G3B1P1_CANTC | G3BF18_CANTC | G3B1P1 | G3BF18 | Uncharacterized protein. | Transcription initiation factor IIF, beta subunit. | 0.865 |
G3B274_CANTC | G3BEC7_CANTC | G3B274 | G3BEC7 | Uncharacterized protein. | SAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14. | 0.787 |
G3B2S0_CANTC | G3B167_CANTC | G3B2S0 | G3B167 | Insert subdomain of RNA polymerase alpha subunit. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
G3B2S0_CANTC | G3B1P1_CANTC | G3B2S0 | G3B1P1 | Insert subdomain of RNA polymerase alpha subunit. | Uncharacterized protein. | 0.834 |
G3B2S0_CANTC | G3B6C5_CANTC | G3B2S0 | G3B6C5 | Insert subdomain of RNA polymerase alpha subunit. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.996 |
G3B2S0_CANTC | G3BAU3_CANTC | G3B2S0 | G3BAU3 | Insert subdomain of RNA polymerase alpha subunit. | RPOL4c domain-containing protein. | 0.999 |
G3B2S0_CANTC | G3BDJ4_CANTC | G3B2S0 | G3BDJ4 | Insert subdomain of RNA polymerase alpha subunit. | TBP-domain-containing protein. | 0.969 |
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