STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB45215.1Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
ORB41049.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
ORB37453.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
ORB33789.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
ORB44236.1
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.842
ORB42207.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.813
ORB43290.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.801
ORB43135.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
ORB37451.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
ORB34217.1
Regulator of Sig8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
ORB45213.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.