STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB43224.1Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)    
Predicted Functional Partners:
ORB43225.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
ORB32774.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.929
ORB42922.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
ORB35161.1
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.886
ORB32777.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.886
ORB43261.1
Type VII secretion-associated serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.882
ORB43223.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.859
ORB43222.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.854
ORB33114.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.848
ORB33733.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.843
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.