STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB42994.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)    
Predicted Functional Partners:
ORB45981.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
ORB42993.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.965
ORB42989.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.898
ORB42992.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.884
ORB42991.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.866
ORB42990.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.837
ORB42988.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.828
ORB35306.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.771
ORB35307.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.770
ORB40861.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.